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HIPPIE
» Human Integrated Protein-Protein Interaction rEference
Protein query
Network query
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Information
Construction of a HIPPIE subnetwork from an input query set of proteins or interactions
Query set
Input a list of
proteins/interactions
Example input:
dnmt3a dnmt3b
(this may take a while)
Alternatively, choose a file to upload
p>
Output parameters
Output type
 
show in browser - text
show in browser - visualization
write to file - HIPPIE TAB format
write to file - PSI-MI TAB 2.5
Layers
 
0 (within input set)
1 (between input and HIPPIE)
Min. number of PPIs to query set
 
 [1,Inf)
Score filter
(optional)
Insert a threshold on the
HIPPIE confidence score
 
 [0,1]
Or, choose predefined
confidence level
 
no filter
medium confidence (0.63)
high confidence (0.72)
Interaction type filter
(optional)
Association (MI:0914)
Physical association (MI:0915)
Direct interaction (MI:0407)
Colocalization (MI:0403)
Tissue filter
(optional)
None